When you perform an Upsert operation in Salesforce Data Loader, it is not possible to select an Auto-Number field as the external ID to match records. This is expected behavior. This article explains why Auto-Number fields are excluded from the Upsert external ID selection.
An Upsert is a Data Loader command that either inserts a new record (if no match is found) or updates an existing record (if a match is found), based on a matching external ID field. Auto-Number fields are system-generated sequential numbers automatically assigned by Salesforce — they cannot be manually set or overwritten.
While it is technically possible to designate an Auto-Number field as an external ID, Data Loader does not support using it for the Upsert operation. Here is why
As a work around, consider changing the field type can be switched to Text for the time of the update and then back to Auto number again. It is strongly recommended that you backup the data prior to each field type change in case unexpected results occur during the change.
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